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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015915356.1_cds_XP_016465204.1_58177
CDS Infomation

[gene=LOC107788068] [db_xref=GeneID:107788068] [protein=putative pentatricopeptide repeat-containing protein At5g40405] [protein_id=XP_016465204.1] [location=complement(join(31829..32656,32883..33260))] [gbkey=CDS]
Sequence

ATGATTAGCGGGTATTCGAGACTTGGGATGTTGAATGAGTCTTTAAGTTTGTTTAGGGAA
ATGCAGAAGACAGGTGTTTCGCCCGATAAGGTGACAATGGTGAGCGTGATATCGGCTTGT
GCTATGCTTGGGGCATTAGATTTGGGGAGGTGGGTGCATGCTTATATCGACAGGAGATTG
ATTGAGAATGATCTTGAGCTTAGTACTGCGCTTGTTAACATGTATGCAAAGTGTGGATGC
ATTGAGAAGGCAATCGAGTTATTTGAAGCGATGCCTGTTAAAGATTCCAAGGCTTGGAGC
TCAATGATAGTTGGTTTAGCGATAAATGGGCTCGCAGAATATGCATTGGTGACATTTTCC
AGGATGGATAAAGCTAAGGTGGAACCTAACCATGTGACACTTGTTGGGGTACTTATGGCC
TGTGCTCATAGTGGACTAATTTTTGAAGGGAAAAAGTATTGGGCAAGCATGATTGAGTCT
GGTATTGAGCCATCTTTAGAGCACTATGGCTGCATGGTCGATCTGTTAAGCCGTTCAAAC
TTAATTGATGAAGCTTATTCATTTGTCGAAGCCATGCCACTCACCCCGTGTCCAGCAATA
TTGCGCACATTACTTTTTGGGTGCAAAAAGAACAAGATCTTGGACAAAGGTGAAATTCTC
GGCCAGCATCTCATTGAATTAGAGCCGTGGAATGCAGAGAACTATATCCTACTGTCTAGT
TTGTATGCATCGGTATCAGACTGGGAAAAAATGCGCCACGTGAGGAAGCAGATGAAAGAC
AAAGGGATTAAGGCAATGCCAGGATGCAGTTCCATTGAAGTTGACGGTCTTGTGCACGAG
TTCATAATGGGTGATTGGTCGCACCCTGAAGCAGAGGAGATCAAAGAAGTCCTAAGAGAT
ATATCGCAAAGGGTATATTCTACAGGTCATGAACCTTGGATTGCTACTATACTGCACAAT
GTGAGTGATGAAGAGAAGGAAATTGCTCTATGTGAGCACAGTGAAAGGTTGGCTATTGCG
TTTGGCCTTTTGAAGACAAAAGCACCAACAGTGATTAGGATAGTGAAGAATCTTAGAGTA
TGTAGAGACTGCCATGAAGTGACAAAGATAATTAGTAGATTATACAACAGAGAGATCATT
GTTAGGGACAGAGTTAGGTTCCACAGGTTTGTCAATGGAGTTTGTTCTTGCAGAGATTTT
TGGTAA

Peptide Sequence

PEP ID

XP_016465204.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At5g40405 [Nicotiana tabacum]
Sequence

MISGYSRLGMLNESLSLFREMQKTGVSPDKVTMVSVISACAMLGALDLGRWVHAYIDRRL
IENDLELSTALVNMYAKCGCIEKAIELFEAMPVKDSKAWSSMIVGLAINGLAEYALVTFS
RMDKAKVEPNHVTLVGVLMACAHSGLIFEGKKYWASMIESGIEPSLEHYGCMVDLLSRSN
LIDEAYSFVEAMPLTPCPAILRTLLFGCKKNKILDKGEILGQHLIELEPWNAENYILLSS
LYASVSDWEKMRHVRKQMKDKGIKAMPGCSSIEVDGLVHEFIMGDWSHPEAEEIKEVLRD
ISQRVYSTGHEPWIATILHNVSDEEKEIALCEHSERLAIAFGLLKTKAPTVIRIVKNLRV
CRDCHEVTKIISRLYNREIIVRDRVRFHRFVNGVCSCRDFW

Transcript Sequence

Gene sequence data has not been registered.